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- 1.annotate::hgByChromsA dataset to show the human genome base pair locations per chromosome.
- 2.annotate::hgCLengthsA dataset which contains the lengths (in base pairs) of the human chromosomes.
- 3.annotate::hgu95AchrolocAnnotation data for the Affymetrix HGU95A GeneChip
- 4.annotate::hgu95AchromAnnotation data for the Affymetrix HGU95A GeneChip
- 5.annotate::hgu95AllAnnotation data for the Affymetrix HGU95A GeneChip
- 6.annotate::hgu95AProbLocschromLocation instance hgu95AProbLocs, an example of a chromLocation object
- 7.annotate::hgu95AsymAnnotation data for the Affymetrix HGU95A GeneChip
- 8.Biobase::aaMapDataset: Names and Characteristics of Amino Acids
- 9.Biobase::geneCovSample expression matrix and phenotype data.frames.
- 10.Biobase::geneCovariateSample expression matrix and phenotype data.frames.
- 11.Biobase::geneDataSample expression matrix and phenotype data.frames.
- 12.Biobase::reporterExample data.frame representing reporter information
- 13.Biobase::sample.ExpressionSetDataset of class 'ExpressionSet'
- 14.Biobase::sample.MultiSetData set of class 'MultiSet'
- 15.Biobase::seDSample expression matrix and phenotype data.frames.
- 16.Biobase::SWClass to Contain High-Throughput Assays and Experimental Metadata
- 17.biocViews::biocViewsVocabBioconductor Task Views Vocabulary Data
- 18.chipseq::cstestA test ChIP-Seq dataset
- 19.genefilter::tdataA small test dataset of Affymetrix Expression data.
- 20.GeneMeta::NevinsIntensity data for 46 Affymetrix slides with tissue samples of breast tumors
- 21.geneplotter::expressionSet133aA small dataset for testing
- 22.geneplotter::IMCAEntrezLinkA function to plot a graph colored by expression data
- 23.GOstats::BdistsDistance matrices for the BCR/ABL and NEG subgroups.
- 24.GOstats::NdistsDistance matrices for the BCR/ABL and NEG subgroups.
- 25.graph::apopGraphKEGG apoptosis pathway graph
- 26.graph::biocReposA graph representing the Bioconductor package repository
- 27.graph::esetsFemaleMultiGraph edgeSet data
- 28.graph::esetsMaleMultiGraph edgeSet data
- 29.graph::graphExamplesA List Of Example Graphs
- 30.graph::IMCAAttrsKEGG Integrin Mediated Cell Adhesion graph
- 31.graph::IMCAGraphKEGG Integrin Mediated Cell Adhesion graph
- 32.graph::MAPKsigA graph encoding parts of the MAPK signaling pathway
- 33.graph::MAPKsigA graph encoding parts of the MAPK signaling pathway
- 34.graph::pancrCaIniA graph encoding parts of the pancreatic cancer initiation pathway
- 35.hgu2beta7::hgu2beta7ACCNUMMappings between probe identifiers and manufacturer or user provided identifiers
- 36.hgu2beta7::hgu2beta7CHRMappings between probe identifiers and the chromosome numbers the genes represented by the probe ids reside
- 37.hgu2beta7::hgu2beta7CHRLENGTHSA named vector for the length of each of the chromosomes
- 38.hgu2beta7::hgu2beta7CHRLOCMappings between probe identifiers and the chromosomal locations of the genes represented by the probe identifiers
- 39.hgu2beta7::hgu2beta7ENZYMEMappings between probe identifiers and the enzyme commission numbers, to which the products of the genes represented by the probe ids correspond
- 40.hgu2beta7::hgu2beta7ENZYME2PROBEMappings between Enzyme Commission numbers and probe identifiers
- 41.hgu2beta7::hgu2beta7GENENAMEMappings between probe identifiers and the names of genes the probe ids correspond to
- 42.hgu2beta7::hgu2beta7GOMappings between probe identifiers and Gene Ontology information
- 43.hgu2beta7::hgu2beta7GO2ALLPROBESMappings between GO identifiers and all the probe idifiers representing genes associated with the GO ids
- 44.hgu2beta7::hgu2beta7GO2PROBEMappings between GO identifiers and probe identifiers representing genes that are directly associated with the GO ids
- 45.hgu2beta7::hgu2beta7GRIFMappings between probe identifiers and the PubMed identifiers for the publication where functional annotation of genes corresponding to the probe ids were made
- 46.hgu2beta7::hgu2beta7LOCUSIDMappings between probe identifiers and LocusLink identifiers
- 47.hgu2beta7::hgu2beta7MAPMappings between probe identifiers and cytogenetic maps/bands
- 48.hgu2beta7::hgu2beta7MAPCOUNTSQuality control information for hgu2beta7
- 49.hgu2beta7::hgu2beta7OMIMMappings between probe identifiers and Mendelian Inheritance in Man (MIM) identifiers
- 50.hgu2beta7::hgu2beta7ORGANISMA character string for the name of the organism
- 51.hgu2beta7::hgu2beta7PATHMappings between probe identifiers and KEGG pathway identifiers
- 52.hgu2beta7::hgu2beta7PATH2PROBEMappings between KEGG pathway identifiers and probe identifiers
- 53.hgu2beta7::hgu2beta7PMIDMappings between probe identifiers and PubMed identifiers
- 54.hgu2beta7::hgu2beta7PMID2PROBEMappings between PubMed identifiers and probe identifiers
- 55.hgu2beta7::hgu2beta7QCQuality control information for hgu2beta7
- 56.hgu2beta7::hgu2beta7REFSEQMappings between probe identifiers and RefSeq identifiers
- 57.hgu2beta7::hgu2beta7SUMFUNCMappings between probe identifiers and summaries of the functions of genes represented by the probe identifiers
- 58.hgu2beta7::hgu2beta7SYMBOLMappings between probe identifiers and gene symbols
- 59.hgu2beta7::hgu2beta7UNIGENEMappings between probe identifiers and UniGene cluster identifiers
- 60.Icens::cmvData on times to shedding of cytomegalovirus and to colonization of mycobacterium avium complex.
- 61.Icens::cosmesisThe time taken until cosmetic deterioration of breast cosmesis.
- 62.Icens::hivIntervals for infection time and disease onset for 257 hemophiliac patients.
- 63.Icens::pruittA small artificial, bivariate right-censored data set.
- 64.liftOver::cur
- 65.RBGL::FileDepFileDep: a graphNEL object representing a file dependency dataset example in boost graph library